Whole Exome sequencing for the 1000 Genomes Project - SRA

SRX103763: Whole Exome sequencing for the 1000 Genomes Project
6 ILLUMINA (Illumina HiSeq 2000) runs: 17.4M spots, 2.8G bases, 1.9Gb downloads

Design: Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection

Submitted by: Broad Institute (BI)

Study: Exome sequencing of (KHV) Kinh in Ho Chi minh City, Vietnam HapMap population

Sample: Coriell HG01863

Library:

Name: Catch-88559

Instrument: Illumina HiSeq 2000

Strategy: WXS

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Spot descriptor:

1 forward barcode

Group tag	Basecalls
tagged_34	AACTTGAC

85 reverse

BI GSSR sample ID: 120492.0 
BI GSSR sample LSID: broadinstitute.org:bsp.prod.sample:25MRQ 
BI project name: C469 
BI work request ID: 26159 

Name	Step	Program	Version
base caller	2011-09-10 08:48:19.0	GAPipeline	RTA1.12.4.2

Runs: 6 runs, 17.4M spots, 2.8G bases, 1.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR359191	2,899,987	464M	318Mb	2011-10-29
SRR361099	2,843,565	455M	311.7Mb	2011-11-04
SRR361109	2,705,844	432.9M	289.6Mb	2011-11-04
SRR361127	2,905,957	465M	316.7Mb	2011-11-04
SRR361129	3,024,926	484M	333.1Mb	2011-11-04
SRR361139	2,999,365	479.9M	328.3Mb	2011-11-04

Supplemental Content

cellular organisms
cellular organisms
De novo sequencing and analysis for ICMP strains in GCM 10K project

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Rugamonas sp. CCM 8940
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Corynebacterium marambiense strain:CCM 8864
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Corynebacterium marambiense strain:CCM 8864 Genome sequencing

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